STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17orf64Chromosome 17 open reading frame 64. (236 aa)    
Predicted Functional Partners:
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.864
SSRP1
Structure specific recognition protein 1.
    
 
 0.857
ENSNVIP00000013265
annotation not available
    
 
 0.832
RANBP2
RAN binding protein 2.
   
 0.790
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.694
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.680
ENSNVIP00000018412
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.655
NIPBL
NIPBL cohesin loading factor.
   
 
 0.623
KDM1A
Lysine demethylase 1A.
   
 0.614
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.590
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.