STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCF1IQ motif containing F1. (209 aa)    
Predicted Functional Partners:
FAR2
Fatty acyl-CoA reductase 2.
    
   0.647
ENSNVIP00000019541
Mitochondrial E3 ubiquitin protein ligase 1.
    
   0.571
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.555
CENPM
Centromere protein M.
      
 0.555
ENSNVIP00000022786
annotation not available
      
 0.499
CCDC181
Coiled-coil domain containing 181.
      
 0.497
CCDC83
Coiled-coil domain containing 83.
      
 0.488
SSTR1
Somatostatin receptor 1.
      
 0.488
RASSF3
Ras association domain family member 3.
      
 0.488
KLHL10
Kelch like family member 10.
      
 0.451
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.