STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IBA57Iron-sulfur cluster assembly factor IBA57. (313 aa)    
Predicted Functional Partners:
ISCA2
Iron-sulfur cluster assembly 2.
  
 
 0.965
ENSNVIP00000026051
annotation not available
     
 0.831
ENSNVIP00000002172
annotation not available
   
 
 0.825
GLDC
Glycine decarboxylase.
     
 0.807
ENSNVIP00000010634
Methylenetetrahydrofolate reductase.
   
 
 0.767
SHMT2
Serine hydroxymethyltransferase 2.
     
 0.751
SHMT1
Serine hydroxymethyltransferase 1.
     
 0.751
AMT
Aminomethyltransferase.
     
 0.750
LIAS
Lipoic acid synthetase.
      
 0.746
ENSNVIP00000010579
annotation not available
  
 
 0.742
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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