Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOXHD1Lipoxygenase homology domains 1. (2279 aa)    
Predicted Functional Partners:
SLC12A2
Solute carrier family 12 member 2.
    
 
 0.754
AGBL1
ATP/GTP binding protein like 1.
    
 0.734
SLC4A11
Solute carrier family 4 member 11.
      
 0.723
RNF165
Ring finger protein 165.
    
 
 0.715
ADGRV1
Adhesion G protein-coupled receptor V1.
    
 
 0.708
MYO3A
Myosin IIIA.
      
 0.706
SLC4A7
Solute carrier family 4 member 7.
      
 0.703
SKOR2
SKI family transcriptional corepressor 2.
      
 0.689
COL8A2
Collagen type VIII alpha 2 chain.
    
 0.626
USH2A
Usherin.
    
 
 0.626
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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