STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXHD1Lipoxygenase homology domains 1. (2279 aa)    
Predicted Functional Partners:
SKOR2
SKI family transcriptional corepressor 2.
      
 0.803
MYO3A
Myosin IIIA.
   
 
 0.770
STRC
Stereocilin.
    
 0.767
KANK4
KN motif and ankyrin repeat domains 4.
    
 
 0.745
TATDN3
TatD DNase domain containing 3.
      
 0.743
ANGEL2
Angel homolog 2.
      
 0.739
OTOL1
Otolin 1.
      
 0.738
TMC2
Transmembrane channel like 2.
    
 0.738
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 0.710
AGBL1
ATP/GTP binding protein like 1.
     
 0.706
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.