ENSNVIP00000001274 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000001274

GTP binding protein overexpressed in skeletal muscle. (296 aa)

Predicted Functional Partners:

CACNB3

0.708

CACNB1

0.656

KIF9

0.614

ITSN2

0.613

ENSNVIP00000031513

0.585

ENSNVIP00000018932

0.574

HERC1

0.572

MDN1

0.563

FRMPD2

0.494

TSC2

0.482

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CACNB1	CACNB3	ENSNVIP00000005746	ENSNVIP00000009383	Calcium voltage-gated channel auxiliary subunit beta 1.	Calcium voltage-gated channel auxiliary subunit beta 3.	0.998
CACNB1	ENSNVIP00000001274	ENSNVIP00000005746	ENSNVIP00000001274	Calcium voltage-gated channel auxiliary subunit beta 1.	GTP binding protein overexpressed in skeletal muscle.	0.656
CACNB3	CACNB1	ENSNVIP00000009383	ENSNVIP00000005746	Calcium voltage-gated channel auxiliary subunit beta 3.	Calcium voltage-gated channel auxiliary subunit beta 1.	0.998
CACNB3	ENSNVIP00000001274	ENSNVIP00000009383	ENSNVIP00000001274	Calcium voltage-gated channel auxiliary subunit beta 3.	GTP binding protein overexpressed in skeletal muscle.	0.708
ENSNVIP00000001274	CACNB1	ENSNVIP00000001274	ENSNVIP00000005746	GTP binding protein overexpressed in skeletal muscle.	Calcium voltage-gated channel auxiliary subunit beta 1.	0.656
ENSNVIP00000001274	CACNB3	ENSNVIP00000001274	ENSNVIP00000009383	GTP binding protein overexpressed in skeletal muscle.	Calcium voltage-gated channel auxiliary subunit beta 3.	0.708
ENSNVIP00000001274	ENSNVIP00000018932	ENSNVIP00000001274	ENSNVIP00000018932	GTP binding protein overexpressed in skeletal muscle.	annotation not available	0.574
ENSNVIP00000001274	ENSNVIP00000031513	ENSNVIP00000001274	ENSNVIP00000031513	GTP binding protein overexpressed in skeletal muscle.	annotation not available	0.585
ENSNVIP00000001274	FRMPD2	ENSNVIP00000001274	ENSNVIP00000007241	GTP binding protein overexpressed in skeletal muscle.	FERM and PDZ domain containing 2.	0.494
ENSNVIP00000001274	HERC1	ENSNVIP00000001274	ENSNVIP00000023802	GTP binding protein overexpressed in skeletal muscle.	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.	0.572
ENSNVIP00000001274	ITSN2	ENSNVIP00000001274	ENSNVIP00000016095	GTP binding protein overexpressed in skeletal muscle.	Intersectin 2.	0.613
ENSNVIP00000001274	KIF9	ENSNVIP00000001274	ENSNVIP00000028875	GTP binding protein overexpressed in skeletal muscle.	Kinesin family member 9.	0.614
ENSNVIP00000001274	MDN1	ENSNVIP00000001274	ENSNVIP00000002147	GTP binding protein overexpressed in skeletal muscle.	Midasin AAA ATPase 1.	0.563
ENSNVIP00000001274	TSC2	ENSNVIP00000001274	ENSNVIP00000029282	GTP binding protein overexpressed in skeletal muscle.	TSC complex subunit 2.	0.482
ENSNVIP00000018932	ENSNVIP00000001274	ENSNVIP00000018932	ENSNVIP00000001274	annotation not available	GTP binding protein overexpressed in skeletal muscle.	0.574
ENSNVIP00000031513	ENSNVIP00000001274	ENSNVIP00000031513	ENSNVIP00000001274	annotation not available	GTP binding protein overexpressed in skeletal muscle.	0.585
ENSNVIP00000031513	ITSN2	ENSNVIP00000031513	ENSNVIP00000016095	annotation not available	Intersectin 2.	0.719
FRMPD2	ENSNVIP00000001274	ENSNVIP00000007241	ENSNVIP00000001274	FERM and PDZ domain containing 2.	GTP binding protein overexpressed in skeletal muscle.	0.494
HERC1	ENSNVIP00000001274	ENSNVIP00000023802	ENSNVIP00000001274	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.	GTP binding protein overexpressed in skeletal muscle.	0.572
HERC1	MDN1	ENSNVIP00000023802	ENSNVIP00000002147	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.	Midasin AAA ATPase 1.	0.584