STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001278Coagulation factor IX. (459 aa)    
Predicted Functional Partners:
F3
Coagulation factor III, tissue factor.
    
 0.879
GGCX
Gamma-glutamyl carboxylase.
    
 0.855
F2
Coagulation factor II, thrombin.
   
 0.840
F5
Coagulation factor V.
   
 0.828
SERPINC1
Serpin family C member 1.
   
 0.822
TFPI
Tissue factor pathway inhibitor.
    
 0.792
SERPIND1
Serpin family D member 1.
   
 0.785
ENSNVIP00000015046
annotation not available
   
 0.759
ENSNVIP00000030625
annotation not available
   
 0.759
ASPH
Aspartate beta-hydroxylase.
    
 0.697
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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