NUB1 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

NUB1

Negative regulator of ubiquitin like proteins 1. (614 aa)

Predicted Functional Partners:

ENSNVIP00000000688

0.997

AIPL1

0.953

UBD

0.949

PSMD2

0.928

PSMD7

0.896

ENSNVIP00000019554

0.885

ENSNVIP00000019648

0.885

PSMC6

0.880

PSMD11

0.876

PSMA2

0.868

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIPL1	NUB1	ENSNVIP00000024009	ENSNVIP00000001282	Aryl hydrocarbon receptor interacting protein like 1.	Negative regulator of ubiquitin like proteins 1.	0.953
ENSNVIP00000000688	ENSNVIP00000019554	ENSNVIP00000000688	ENSNVIP00000019554	NEDD8 ubiquitin like modifier.	annotation not available	0.731
ENSNVIP00000000688	ENSNVIP00000019648	ENSNVIP00000000688	ENSNVIP00000019648	NEDD8 ubiquitin like modifier.	annotation not available	0.731
ENSNVIP00000000688	NUB1	ENSNVIP00000000688	ENSNVIP00000001282	NEDD8 ubiquitin like modifier.	Negative regulator of ubiquitin like proteins 1.	0.997
ENSNVIP00000000688	PSMA2	ENSNVIP00000000688	ENSNVIP00000018565	NEDD8 ubiquitin like modifier.	Proteasome 20S subunit alpha 2.	0.914
ENSNVIP00000000688	PSMC6	ENSNVIP00000000688	ENSNVIP00000002768	NEDD8 ubiquitin like modifier.	Proteasome 26S subunit, ATPase 6.	0.768
ENSNVIP00000000688	PSMD11	ENSNVIP00000000688	ENSNVIP00000025228	NEDD8 ubiquitin like modifier.	Proteasome 26S subunit, non-ATPase 11.	0.776
ENSNVIP00000000688	PSMD2	ENSNVIP00000000688	ENSNVIP00000019292	NEDD8 ubiquitin like modifier.	Proteasome 26S subunit, non-ATPase 2.	0.786
ENSNVIP00000000688	PSMD7	ENSNVIP00000000688	ENSNVIP00000009593	NEDD8 ubiquitin like modifier.	Proteasome 26S subunit, non-ATPase 7.	0.853
ENSNVIP00000000688	UBD	ENSNVIP00000000688	ENSNVIP00000027033	NEDD8 ubiquitin like modifier.	Ubiquitin D.	0.791
ENSNVIP00000019554	ENSNVIP00000000688	ENSNVIP00000019554	ENSNVIP00000000688	annotation not available	NEDD8 ubiquitin like modifier.	0.731
ENSNVIP00000019554	ENSNVIP00000019648	ENSNVIP00000019554	ENSNVIP00000019648	annotation not available	annotation not available	0.543
ENSNVIP00000019554	NUB1	ENSNVIP00000019554	ENSNVIP00000001282	annotation not available	Negative regulator of ubiquitin like proteins 1.	0.885
ENSNVIP00000019554	PSMA2	ENSNVIP00000019554	ENSNVIP00000018565	annotation not available	Proteasome 20S subunit alpha 2.	0.984
ENSNVIP00000019554	PSMC6	ENSNVIP00000019554	ENSNVIP00000002768	annotation not available	Proteasome 26S subunit, ATPase 6.	0.989
ENSNVIP00000019554	PSMD11	ENSNVIP00000019554	ENSNVIP00000025228	annotation not available	Proteasome 26S subunit, non-ATPase 11.	0.993
ENSNVIP00000019554	PSMD2	ENSNVIP00000019554	ENSNVIP00000019292	annotation not available	Proteasome 26S subunit, non-ATPase 2.	0.995
ENSNVIP00000019554	PSMD7	ENSNVIP00000019554	ENSNVIP00000009593	annotation not available	Proteasome 26S subunit, non-ATPase 7.	0.994
ENSNVIP00000019554	UBD	ENSNVIP00000019554	ENSNVIP00000027033	annotation not available	Ubiquitin D.	0.434
ENSNVIP00000019648	ENSNVIP00000000688	ENSNVIP00000019648	ENSNVIP00000000688	annotation not available	NEDD8 ubiquitin like modifier.	0.731