STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL4A3Collagen type IV alpha 3 chain. (1652 aa)    
Predicted Functional Partners:
COL4A6
Collagen type IV alpha 6 chain.
  
0.916
COL4A2
Collagen type IV alpha 2 chain.
  
0.911
ITGA1
Integrin subunit alpha 1.
   
 0.805
COL4A4
Collagen type IV alpha 4 chain.
  
 
 
0.791
ITGA11
Integrin subunit alpha 11.
   
 0.754
ITGA2
Integrin subunit alpha 2.
    
 0.753
ITGB1
Integrin subunit beta 1.
   
 0.752
ITGA3
Integrin subunit alpha 3.
    
 0.746
ITGB5
Integrin subunit beta 5.
    
 0.745
ITGAV
Integrin subunit alpha V.
    
 0.743
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.