STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFL1UFM1 specific ligase 1. (792 aa)    
Predicted Functional Partners:
DDRGK1
DDRGK domain containing 1.
    
 
 0.960
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
 
 0.952
UBA5
Ubiquitin like modifier activating enzyme 5.
   
 
 0.891
ENSNVIP00000002103
Ubiquitin-fold modifier conjugating enzyme 1.
    
 
 0.854
UFSP2
UFM1 specific peptidase 2.
   
  
 0.766
UFSP1
UFM1 specific peptidase 1 (inactive).
   
  
 0.752
SRD5A3
Steroid 5 alpha-reductase 3.
      
 0.734
ENSNVIP00000002231
annotation not available
   
 
 0.685
ENSNVIP00000026714
annotation not available
   
 
 0.685
UBA6
Ubiquitin like modifier activating enzyme 6.
     
 0.674
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.