Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFDNAfadin, adherens junction formation factor. (1833 aa)    
Predicted Functional Partners:
NECTIN3
Nectin cell adhesion molecule 3.
    
 0.994
NECTIN2
Nectin cell adhesion molecule 2.
    
 0.990
NECTIN1
Nectin cell adhesion molecule 1.
    
 0.984
TJP1
Tight junction protein 1.
   
 0.978
ENSNVIP00000013007
annotation not available
   
 0.977
ENSNVIP00000001371
RAP1A, member of RAS oncogene family.
    
 0.970
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.970
CTNNA3
Catenin alpha 3.
   
 0.969
ENSNVIP00000001458
KRAS proto-oncogene, GTPase.
    
 0.956
F11R
F11 receptor.
    
 0.955
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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