STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASC1Cancer susceptibility 1. (721 aa)    
Predicted Functional Partners:
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.863
CCDC65
Coiled-coil domain containing 65.
   
 
 0.855
CFAP44
Cilia and flagella associated protein 44.
    
 
 0.855
NME8
NME/NM23 family member 8.
   
 
 0.831
CCDC113
Coiled-coil domain containing 113.
    
   0.828
WDR90
WD repeat domain 90.
    
   0.828
ZMYND12
Zinc finger MYND-type containing 12.
    
   0.828
EFHB
EF-hand domain family member B.
    
   0.828
ENSNVIP00000014423
Dynein regulatory complex subunit 1.
   
 
 0.799
WDR63
WD repeat domain 63.
   
 
 0.786
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.