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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHPF2Chondroitin polymerizing factor 2. (780 aa)    
Predicted Functional Partners:
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
    
0.951
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
    
0.946
CHPF
Chondroitin polymerizing factor.
  
  
0.943
CHSY1
Chondroitin sulfate synthase 1.
    
0.906
CHSY3
Chondroitin sulfate synthase 3.
    
0.906
EXTL1
Exostosin like glycosyltransferase 1.
      
 0.767
ENSNVIP00000011773
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.766
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.752
HEPHL1
Hephaestin like 1.
      
 0.697
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
      
 0.692
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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