STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR39U1Short chain dehydrogenase/reductase family 39U member 1. (294 aa)    
Predicted Functional Partners:
F2RL3
F2R like thrombin or trypsin receptor 3.
     
  0.710
NCLN
Nicalin.
      
 0.706
NYNRIN
NYN domain and retroviral integrase containing.
      
 0.693
STOML1
Stomatin like 1.
  
  
 0.688
TRMT2A
tRNA methyltransferase 2 homolog A.
      
 0.565
CBLN3
Cerebellin 3 precursor.
     
 0.562
ENSNVIP00000014807
Ciliary associated calcium binding coiled-coil 1.
      
 0.542
CCDC146
Coiled-coil domain containing 146.
      
 0.533
FECH
Ferrochelatase.
  
    0.499
AAGAB
Alpha and gamma adaptin binding protein.
      
 0.498
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.