STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR39U1Short chain dehydrogenase/reductase family 39U member 1. (294 aa)    
Predicted Functional Partners:
STOML1
Stomatin like 1.
  
  
 0.789
NCLN
Nicalin.
      
 0.759
NYNRIN
NYN domain and retroviral integrase containing.
      
 0.758
CBLN3
Cerebellin 3 precursor.
      
 0.622
AAGAB
Alpha and gamma adaptin binding protein.
      
 0.613
FECH
Ferrochelatase.
  
  
 0.576
TRIM46
Tripartite motif containing 46.
   
  
 0.543
MORC2
MORC family CW-type zinc finger 2.
      
 0.542
SLC36A4
Solute carrier family 36 member 4.
      
 0.542
ZNF646
Zinc finger protein 646.
      
 0.542
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.