STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX1Caudal type homeobox 1. (265 aa)    
Predicted Functional Partners:
CDH17
Cadherin 17.
   
  
 0.729
EPC2
Enhancer of polycomb homolog 2.
      
 0.656
TFF3
Trefoil factor 3.
      
 0.591
TFG
Trafficking from ER to golgi regulator.
    
 
 0.533
ENSNVIP00000008351
Lymphoid enhancer binding factor 1.
    
 
 0.532
MS4A12
Membrane spanning 4-domains A12.
      
 0.525
REG4
Regenerating family member 4.
   
  
 0.492
AXIN2
Axin 2.
      
 0.474
FGFBP3
Fibroblast growth factor binding protein 3.
      
 0.473
B3GNT5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
      
 0.470
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.