Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETFRF1Electron transfer flavoprotein regulatory factor 1. (90 aa)    
Predicted Functional Partners:
ETFA
Electron transfer flavoprotein subunit alpha.
   
 
 0.859
ETFB
Electron transfer flavoprotein subunit beta.
    
 
 0.846
MRPL46
Mitochondrial ribosomal protein L46.
    
   0.825
LYRM1
LYR motif containing 1.
      
 0.754
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
    
 
 0.693
PALB2
Partner and localizer of BRCA2.
    
 
 0.693
SYT3
Synaptotagmin 3.
      
 0.555
IDE
Insulin degrading enzyme.
      
 0.541
ETNPPL
Ethanolamine-phosphate phospho-lyase.
      
 0.512
ELOVL2
ELOVL fatty acid elongase 2.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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