STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCOLCEProcollagen C-endopeptidase enhancer. (448 aa)    
Predicted Functional Partners:
TLL2
Tolloid like 2.
   
 0.631
ENSNVIP00000029811
Tolloid like 1.
   
 0.631
BMP1
Bone morphogenetic protein 1.
   
 0.631
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.561
TCN2
Transcobalamin 2.
    
 0.504
AMBN
Ameloblastin.
      
 0.488
GC
GC vitamin D binding protein.
    
 0.487
TCN1
Transcobalamin 1.
    
 0.471
CBLIF
Cobalamin binding intrinsic factor.
    
 0.471
MST1R
Macrophage stimulating 1 receptor.
    
 0.442
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.