STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM17Tripartite motif containing 17. (473 aa)    
Predicted Functional Partners:
ENSNVIP00000021206
Gamma-butyrobetaine hydroxylase 1.
      
 0.754
TRIM44
Tripartite motif containing 44.
    
 
 0.740
ENSNVIP00000030368
Ubiquitin conjugating enzyme E2 D1.
   
 0.698
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.671
TRIM28
Tripartite motif containing 28.
    
 
 0.624
PDE5A
Phosphodiesterase 5A.
   
 0.616
USP13
Ubiquitin specific peptidase 13.
    
 
 0.573
TRIM24
Tripartite motif containing 24.
    
 
 0.564
TRIM9
Tripartite motif containing 9.
    
 0.536
TRIM66
Tripartite motif containing 66.
      
 0.517
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.