STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM17Tripartite motif containing 17. (473 aa)    
Predicted Functional Partners:
USP13
Ubiquitin specific peptidase 13.
    
 
 0.772
ENSNVIP00000002124
Josephin domain containing 1.
      
 0.750
USP9X
Ubiquitin specific peptidase 9 X-linked.
     
 0.627
PDE5A
Phosphodiesterase 5A.
   
 0.563
RNF149
Ring finger protein 149.
     
 0.524
LNX1
Ligand of numb-protein X 1.
    
 
 0.516
UBA7
Ubiquitin like modifier activating enzyme 7.
    
 0.506
CASP3
Caspase 3.
    
 0.503
USP4
Ubiquitin specific peptidase 4.
    
 
 0.483
MCL1
MCL1 apoptosis regulator, BCL2 family member.
    
 
 0.481
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.