STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMNTD1Lamin tail domain containing 1. (388 aa)    
Predicted Functional Partners:
LEMD3
LEM domain containing 3.
    
 0.779
EMD
Emerin.
    
 0.739
ENSNVIP00000012538
annotation not available
    
 0.695
ENSNVIP00000019289
annotation not available
    
 0.695
NUP153
Nucleoporin 153.
    
 
 0.678
RASSF8
Ras association domain family member 8.
      
 0.640
TMPO
Thymopoietin.
   
 0.636
GPR87
G protein-coupled receptor 87.
      
 0.614
NUP98
Nucleoporin 98.
   
 
 0.563
RBM39
RNA binding motif protein 39.
   
 0.554
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.