STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQUBIQ motif and ubiquitin domain containing. (747 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
   
 0.938
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.934
RSPH1
Radial spoke head component 1.
   
 0.915
ENSNVIP00000007399
Chromosome 4 open reading frame 47.
   
 
 0.912
ENSNVIP00000009304
annotation not available
    
 
 0.907
DNAH10
Dynein axonemal heavy chain 10.
   
 
 0.901
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.891
ENSNVIP00000026780
Sperm autoantigenic protein 17.
   
 
 0.891
IQCD
IQ motif containing D.
   
 
 0.888
ENSNVIP00000007962
annotation not available
   
 
 0.885
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.