STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM115Transmembrane protein 115. (351 aa)    
Predicted Functional Partners:
ENSNVIP00000019541
Mitochondrial E3 ubiquitin protein ligase 1.
   
    0.834
COG2
Component of oligomeric golgi complex 2.
   
 
  0.766
COG4
Component of oligomeric golgi complex 4.
     
 0.754
COG5
Component of oligomeric golgi complex 5.
     
 0.747
ENSNVIP00000028385
annotation not available
     
  0.717
UBL7
Ubiquitin like 7.
      
 0.705
COG1
Component of oligomeric golgi complex 1.
     
 0.702
COG7
Component of oligomeric golgi complex 7.
     
 0.700
ENSNVIP00000010236
annotation not available
     
 0.700
DCTN4
Dynactin subunit 4.
     
  0.688
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.