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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCA1LIQ motif containing with AAA domain 1 like. (816 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.954
FAM189A1
Family with sequence similarity 189 member A1.
     
 0.756
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.750
ENSNVIP00000023202
annotation not available
   
 0.729
IST1
IST1 factor associated with ESCRT-III.
    
 0.693
ENSNVIP00000015232
YOD1 deubiquitinase.
   
 0.683
UBXN1
UBX domain protein 1.
   
 0.676
GBX1
Gastrulation brain homeobox 1.
      
 0.654
FAAP100
FA core complex associated protein 100.
   
 0.637
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.637
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.