STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RETREG1Reticulophagy regulator 1. (499 aa)    
Predicted Functional Partners:
ENSNVIP00000004010
NMD3 ribosome export adaptor.
   
 
 0.910
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.889
ENSNVIP00000002393
annotation not available
   
 
 0.849
ENSNVIP00000015539
annotation not available
   
 
 0.849
ENSNVIP00000028983
annotation not available
   
 
 0.820
GNL2
G protein nucleolar 2.
   
 
 0.818
GTPBP4
GTP binding protein 4.
   
  
 0.804
ENSNVIP00000019827
Eukaryotic translation initiation factor 6.
   
 
 0.804
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
 
 0.775
ENSNVIP00000016118
Bystin like.
   
  
 0.766
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.