STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001590Transmembrane 4 L six family member 20. (229 aa)    
Predicted Functional Partners:
TM4SF4
Transmembrane 4 L six family member 4.
   
  
 0.764
CD74
CD74 molecule.
    
 
 0.622
CERS6
Ceramide synthase 6.
      
 0.611
PLLP
Plasmolipin.
      
 0.562
GPA33
Glycoprotein A33.
      
 0.541
GJB3
Gap junction protein beta 3.
      
 0.539
GJB5
Gap junction protein beta 5.
      
 0.535
GJB4
Gap junction protein beta 4.
      
 0.494
ENSNVIP00000017540
Transmembrane 4 L six family member 18.
      
 0.451
DEFB129
Defensin beta 129.
      
 0.448
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.