STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001601annotation not available (99 aa)    
Predicted Functional Partners:
RBM8A
RNA binding motif protein 8A.
   
 0.957
CASC3
CASC3 exon junction complex subunit.
    
 0.935
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.932
SAP18
Sin3A associated protein 18.
   
 0.920
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.916
PNN
Pinin, desmosome associated protein.
   
 0.895
ENSNVIP00000016034
annotation not available
   
 0.880
UPF1
UPF1 RNA helicase and ATPase.
   
 0.873
PYM1
PYM homolog 1, exon junction complex associated factor.
    
 0.869
ALYREF
Aly/REF export factor.
   
 0.867
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.