STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF622Zinc finger protein 622. (475 aa)    
Predicted Functional Partners:
ENSNVIP00000004010
NMD3 ribosome export adaptor.
   
 
 0.954
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.934
ENSNVIP00000019827
Eukaryotic translation initiation factor 6.
   
 
 0.908
ENSNVIP00000028983
annotation not available
   
 
 0.888
GNL2
G protein nucleolar 2.
   
 
 0.825
GNL1
G protein nucleolar 1 (putative).
   
 
 0.809
ZNF593
Zinc finger protein 593.
   
  
 0.804
RPL24
Ribosomal protein L24.
    
 
 0.792
ENSNVIP00000023843
annotation not available
   
 
 0.771
GTPBP4
GTP binding protein 4.
   
  
 0.768
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.