STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBX1Gastrulation brain homeobox 1. (359 aa)    
Predicted Functional Partners:
ENSNVIP00000022203
annotation not available
      
 0.557
IQCA1L
IQ motif containing with AAA domain 1 like.
      
 0.541
NPAS1
Neuronal PAS domain protein 1.
      
 0.508
FAM189A1
Family with sequence similarity 189 member A1.
      
 0.496
ZNF391
Zinc finger protein 391.
    
 
 0.481
LHX8
LIM homeobox 8.
   
 0.461
LHX6
LIM homeobox 6.
   
 0.461
MED29
Mediator complex subunit 29.
      
 0.416
LMO1
LIM domain only 1.
   
 0.405
LMO3
LIM domain only 3.
   
 0.405
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.