STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP7Sp7 transcription factor. (431 aa)    
Predicted Functional Partners:
ENSNVIP00000021289
Alkaline phosphatase, biomineralization associated.
      
 0.724
RUNX2
RUNX family transcription factor 2.
    
 0.667
COL10A1
Collagen type X alpha 1 chain.
    
 0.577
BGLAP
Bone gamma-carboxyglutamate protein.
    
 0.568
ENSNVIP00000031995
CD4 molecule.
     
 0.562
MEPE
Matrix extracellular phosphoglycoprotein.
      
 0.506
IBSP
Integrin binding sialoprotein.
    
 
 0.505
COL1A1
Collagen type I alpha 1 chain.
    
 0.498
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
     
 0.497
CD68
CD68 molecule.
      
 0.494
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.