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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD6Tigger transposable element derived 6. (524 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.620
ENSNVIP00000013698
Nuclear apoptosis inducing factor 1.
   
  
 0.616
PDE6A
Phosphodiesterase 6A.
      
 0.534
PDE6C
Phosphodiesterase 6C.
      
 0.518
ENSNVIP00000008736
annotation not available
      
 0.518
SLC26A2
Solute carrier family 26 member 2.
      
 0.482
PDE5A
Phosphodiesterase 5A.
      
 0.473
PDE10A
Phosphodiesterase 10A.
      
 0.472
ENSNVIP00000013132
annotation not available
    
  0.459
PDE6B
Phosphodiesterase 6B.
      
 0.430
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.