STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf42Chromosome 11 open reading frame 42. (333 aa)    
Predicted Functional Partners:
TNP1
Transition protein 1.
  
     0.519
SNX5
Sorting nexin 5.
    
 
 0.500
ZNHIT2
Zinc finger HIT-type containing 2.
      
 0.488
ENSNVIP00000015450
annotation not available
  
     0.483
FNDC8
Fibronectin type III domain containing 8.
  
     0.482
DEFB123
Defensin beta 123.
  
     0.448
LRRC36
Leucine rich repeat containing 36.
  
     0.439
KLHDC7A
Kelch domain containing 7A.
      
 0.439
PKNOX2
PBX/knotted 1 homeobox 2.
   
  
 0.437
POLDIP3
DNA polymerase delta interacting protein 3.
      
 0.437
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.