STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf42Chromosome 11 open reading frame 42. (333 aa)    
Predicted Functional Partners:
TNP1
Transition protein 1.
  
     0.519
ENSNVIP00000015450
annotation not available
  
     0.483
FNDC8
Fibronectin type III domain containing 8.
  
     0.482
DEFB123
Defensin beta 123.
  
     0.448
LRRC36
Leucine rich repeat containing 36.
  
     0.439
FAM71F1
Family with sequence similarity 71 member F1.
  
     0.427
DKKL1
Dickkopf like acrosomal protein 1.
  
     0.409
ENSNVIP00000003446
annotation not available
  
     0.407
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.