STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3AUbiquitin protein ligase E3A. (838 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.996
ENSNVIP00000031759
Catenin beta 1.
    
 0.982
ENSNVIP00000030368
Ubiquitin conjugating enzyme E2 D1.
    
 0.974
TSC2
TSC complex subunit 2.
    
 0.965
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
   
 0.955
PSMD14
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.942
ESR1
Estrogen receptor 1.
    
 
 0.942
SCRIB
Scribble planar cell polarity protein.
    
 0.942
TAT
Tyrosine aminotransferase.
    
   0.937
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
   
 0.927
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.