STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3AUbiquitin protein ligase E3A. (838 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.994
ENSNVIP00000031138
Phosphatase and tensin homolog.
   
 
 0.955
ENSNVIP00000031759
Catenin beta 1.
    
 0.955
NFX1
Nuclear transcription factor, X-box binding 1.
     
 0.953
SCRIB
Scribble planar cell polarity protein.
    
 0.949
TSC1
TSC complex subunit 1.
    
 0.946
PATJ
PATJ crumbs cell polarity complex component.
     
 0.935
TSC2
TSC complex subunit 2.
    
 0.927
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.889
ENSNVIP00000019554
annotation not available
    
 
 0.876
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.