STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB30RAB30, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4.
    
 0.889
CHML
CHM like Rab escort protein.
    
 0.833
CHM
CHM Rab escort protein.
    
 0.833
COG5
Component of oligomeric golgi complex 5.
     
 0.823
ENSNVIP00000026956
Component of oligomeric golgi complex 6.
     
 0.817
ENSNVIP00000010236
annotation not available
     
 0.816
COG2
Component of oligomeric golgi complex 2.
     
 0.812
COG1
Component of oligomeric golgi complex 1.
     
 0.766
AVL9
AVL9 cell migration associated.
      
 0.754
COG7
Component of oligomeric golgi complex 7.
     
 0.731
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.