STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)    
Predicted Functional Partners:
CLP1
Cleavage and polyadenylation factor I subunit 1.
   
 0.996
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 0.995
ENSNVIP00000013270
Cleavage and polyadenylation specific factor 2.
   
 0.992
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.991
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.989
SYMPK
Symplekin.
    
 0.988
CPSF6
Cleavage and polyadenylation specific factor 6.
    
 0.987
CPSF7
Cleavage and polyadenylation specific factor 7.
    
 0.982
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.981
ENSNVIP00000004186
annotation not available
   
 0.972
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.