STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)    
Predicted Functional Partners:
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.998
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.996
ENSNVIP00000013270
Cleavage and polyadenylation specific factor 2.
   
 0.993
SYMPK
Symplekin.
    
 0.991
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.989
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 
 0.964
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.954
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
    
 0.954
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.941
ENSNVIP00000006819
annotation not available
   
 
 0.936
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.