STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin like domain containing 1. (293 aa)    
Predicted Functional Partners:
RNF170
Ring finger protein 170.
    
 
 0.775
C6orf120
Chromosome 6 open reading frame 120.
      
 0.765
TMEM259
Transmembrane protein 259.
    
 
 0.763
HERPUD2
HERPUD family member 2.
      
 0.761
FAM8A1
Family with sequence similarity 8 member A1.
      
 0.756
RNF5
Ring finger protein 5.
    
 
 0.746
ENSNVIP00000003486
Transmembrane protein 126A.
      
 0.721
ERLIN2
ER lipid raft associated 2.
    
 
 0.720
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
  
 0.700
ERLIN1
ER lipid raft associated 1.
    
 
 0.649
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.