STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin like domain containing 1. (293 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.955
RNF170
Ring finger protein 170.
    
 
 0.936
ERLIN1
ER lipid raft associated 1.
    
 
 0.923
RNF5
Ring finger protein 5.
    
 
 0.916
ENSNVIP00000029205
Transmembrane and ubiquitin like domain containing 2.
    
   0.864
TMEM259
Transmembrane protein 259.
    
 
 0.861
ENSNVIP00000001512
Ring finger protein 185.
    
 
 0.806
AMFR
Autocrine motility factor receptor.
    
 
 0.729
C6orf120
Chromosome 6 open reading frame 120.
      
 0.722
DUSP3
Dual specificity phosphatase 3.
   
   0.646
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.