STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC40A1Solute carrier family 40 member 1. (575 aa)    
Predicted Functional Partners:
HAMP
Hepcidin antimicrobial peptide.
    
 0.994
ENSNVIP00000018732
annotation not available
    
 0.972
HEPHL1
Hephaestin like 1.
    
 0.851
ENSNVIP00000017618
annotation not available
    
 0.851
CP
Ceruloplasmin.
    
 0.851
SLC11A2
Solute carrier family 11 member 2.
      
 0.754
APP
Amyloid beta precursor protein.
    
 
 0.696
ENSNVIP00000008391
Cytochrome b reductase 1.
      
 0.694
TFR2
Transferrin receptor 2.
      
 0.648
HFE
Homeostatic iron regulator.
      
 0.641
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.