STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPD1Sphingomyelin phosphodiesterase 1. (636 aa)    
Predicted Functional Partners:
SGMS1
Sphingomyelin synthase 1.
     
 0.984
SGMS2
Sphingomyelin synthase 2.
     
 0.983
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.980
ENSNVIP00000005973
Sphingomyelin phosphodiesterase 2.
     
 0.974
GBA
Glucosylceramidase beta.
   
 
 0.973
CERS6
Ceramide synthase 6.
     
 0.972
DEGS1
Delta 4-desaturase, sphingolipid 1.
     
 0.971
CERS5
Ceramide synthase 5.
     
 0.968
GBA2
Glucosylceramidase beta 2.
     
 0.968
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.968
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.