STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain 42. (514 aa)    
Predicted Functional Partners:
CCDC90B
Coiled-coil domain containing 90B.
      
 0.742
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 
 0.664
ENSNVIP00000030927
Protein phosphatase 1 regulatory subunit 8.
   
  
 0.664
ROS1
ROS proto-oncogene 1, receptor tyrosine kinase.
    
 0.592
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
      
 0.579
ENSNVIP00000004007
bolA family member 1.
      
 0.566
ENSNVIP00000014175
annotation not available
    
 
 0.561
HSDL2
Hydroxysteroid dehydrogenase like 2.
    
 0.559
RAB30
RAB30, member RAS oncogene family.
      
 0.540
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 
 0.532
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.