STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain 42. (514 aa)    
Predicted Functional Partners:
IQUB
IQ motif and ubiquitin domain containing.
   
   0.847
ENSNVIP00000026735
annotation not available
   
  0.842
ZBBX
Zinc finger B-box domain containing.
   
    0.840
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 
 0.773
CCDC90B
Coiled-coil domain containing 90B.
      
 0.768
RAB30
RAB30, member RAS oncogene family.
      
 0.707
ENSNVIP00000004007
bolA family member 1.
      
 0.656
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 
 0.627
HSDL2
Hydroxysteroid dehydrogenase like 2.
    
 0.559
DNAI1
Dynein axonemal intermediate chain 1.
     
 0.511
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.