STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WASHC5WASH complex subunit 5. (1159 aa)    
Predicted Functional Partners:
WASHC4
WASH complex subunit 4.
  
 0.998
WASHC3
WASH complex subunit 3.
    
 0.990
WASHC1
WASH complex subunit 1.
   
 0.975
ENSNVIP00000006099
annotation not available
   
 0.968
FKBP15
FKBP prolyl isomerase 15.
    
 
 0.937
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.923
SLF2
SMC5-SMC6 complex localization factor 2.
   
 
 0.856
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
    
 0.835
VPS35
VPS35 retromer complex component.
    
 
 0.790
AP3B1
Adaptor related protein complex 3 subunit beta 1.
   
 
 0.755
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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