STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001786KIAA0408. (692 aa)    
Predicted Functional Partners:
PHF1
PHD finger protein 1.
    
   0.696
POLR3C
RNA polymerase III subunit C.
    
   0.696
ENSNVIP00000001765
annotation not available
 
 
  
 0.622
ENSNVIP00000024606
Metabolism of cobalamin associated C.
     
 0.582
C6orf58
Chromosome 6 open reading frame 58.
      
 0.559
PTPRK
Protein tyrosine phosphatase receptor type K.
      
 0.511
SCARA5
Scavenger receptor class A member 5.
      
 0.502
DAGLA
Diacylglycerol lipase alpha.
      
 0.478
RNF146
Ring finger protein 146.
      
 0.475
ABI3
ABI family member 3.
    
 
 0.470
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.