Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USF1Upstream transcription factor 1. (310 aa)    
Predicted Functional Partners:
USF2
Upstream transcription factor 2, c-fos interacting.
   
 0.997
GTF2I
General transcription factor IIi.
    
 
 0.916
FOSL1
FOS like 1, AP-1 transcription factor subunit.
    
 
 0.840
EP300
E1A binding protein p300.
    
 0.833
SP1
Sp1 transcription factor.
    
 0.820
MED1
Mediator complex subunit 1.
     
  0.786
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
   
 
 0.741
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
   
 
 0.741
MAPK11
Mitogen-activated protein kinase 11.
    
 0.717
MAPK14
Mitogen-activated protein kinase 14.
    
 0.717
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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