Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWA8Von Willebrand factor A domain containing 8. (1905 aa)    
Predicted Functional Partners:
C19orf47
Chromosome 19 open reading frame 47.
   
    0.993
ENSNVIP00000026799
Nudix hydrolase 12.
   
 0.831
ENSNVIP00000026948
annotation not available
    
 
 0.668
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.647
FOXA1
Forkhead box A1.
    
   0.642
TRMT61B
tRNA methyltransferase 61B.
      
 0.642
FAAP24
FA core complex associated protein 24.
    
 0.633
ENSNVIP00000017400
Heat shock protein family B (small) member 8.
    
   0.628
DHX33
DEAH-box helicase 33.
    
   0.628
C1orf194
Chromosome 1 open reading frame 194.
    
 
 0.600
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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