C16orf71 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

C16orf71

Chromosome 16 open reading frame 71. (499 aa)

Predicted Functional Partners:

ENSNVIP00000012774

0.731

MRPS6

0.711

MRPS10

0.709

MRPS9

0.703

MRPS16

0.686

MRPS11

0.679

WDR90

0.666

MRPS22

0.657

ENSNVIP00000006300

0.650

ENSNVIP00000006348

0.650

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C16orf71	ENSNVIP00000006300	ENSNVIP00000001867	ENSNVIP00000006300	Chromosome 16 open reading frame 71.	annotation not available	0.650
C16orf71	ENSNVIP00000006348	ENSNVIP00000001867	ENSNVIP00000006348	Chromosome 16 open reading frame 71.	annotation not available	0.650
C16orf71	ENSNVIP00000012774	ENSNVIP00000001867	ENSNVIP00000012774	Chromosome 16 open reading frame 71.	annotation not available	0.731
C16orf71	MRPS10	ENSNVIP00000001867	ENSNVIP00000015948	Chromosome 16 open reading frame 71.	Mitochondrial ribosomal protein S10.	0.709
C16orf71	MRPS11	ENSNVIP00000001867	ENSNVIP00000023250	Chromosome 16 open reading frame 71.	Mitochondrial ribosomal protein S11.	0.679
C16orf71	MRPS16	ENSNVIP00000001867	ENSNVIP00000012209	Chromosome 16 open reading frame 71.	Mitochondrial ribosomal protein S16.	0.686
C16orf71	MRPS22	ENSNVIP00000001867	ENSNVIP00000021345	Chromosome 16 open reading frame 71.	Mitochondrial ribosomal protein S22.	0.657
C16orf71	MRPS6	ENSNVIP00000001867	ENSNVIP00000008744	Chromosome 16 open reading frame 71.	Mitochondrial ribosomal protein S6.	0.711
C16orf71	MRPS9	ENSNVIP00000001867	ENSNVIP00000017959	Chromosome 16 open reading frame 71.	Mitochondrial ribosomal protein S9.	0.703
C16orf71	WDR90	ENSNVIP00000001867	ENSNVIP00000019638	Chromosome 16 open reading frame 71.	WD repeat domain 90.	0.666
ENSNVIP00000006300	C16orf71	ENSNVIP00000006300	ENSNVIP00000001867	annotation not available	Chromosome 16 open reading frame 71.	0.650
ENSNVIP00000006300	ENSNVIP00000006348	ENSNVIP00000006300	ENSNVIP00000006348	annotation not available	annotation not available	0.983
ENSNVIP00000006300	MRPS11	ENSNVIP00000006300	ENSNVIP00000023250	annotation not available	Mitochondrial ribosomal protein S11.	0.439
ENSNVIP00000006300	MRPS9	ENSNVIP00000006300	ENSNVIP00000017959	annotation not available	Mitochondrial ribosomal protein S9.	0.522
ENSNVIP00000006300	WDR90	ENSNVIP00000006300	ENSNVIP00000019638	annotation not available	WD repeat domain 90.	0.518
ENSNVIP00000006348	C16orf71	ENSNVIP00000006348	ENSNVIP00000001867	annotation not available	Chromosome 16 open reading frame 71.	0.650
ENSNVIP00000006348	ENSNVIP00000006300	ENSNVIP00000006348	ENSNVIP00000006300	annotation not available	annotation not available	0.983
ENSNVIP00000006348	MRPS11	ENSNVIP00000006348	ENSNVIP00000023250	annotation not available	Mitochondrial ribosomal protein S11.	0.439
ENSNVIP00000006348	MRPS9	ENSNVIP00000006348	ENSNVIP00000017959	annotation not available	Mitochondrial ribosomal protein S9.	0.522
ENSNVIP00000006348	WDR90	ENSNVIP00000006348	ENSNVIP00000019638	annotation not available	WD repeat domain 90.	0.518