Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRQProtein tyrosine phosphatase receptor type Q. (2333 aa)    
Predicted Functional Partners:
MYO6
Myosin VI.
    
 
 0.692
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.688
PTPRM
Protein tyrosine phosphatase receptor type M.
    
 0.647
PTPRT
Protein tyrosine phosphatase receptor type T.
    
 0.647
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
    
 
 0.646
OTOGL
Otogelin like.
 
 
 0.645
ENSNVIP00000009656
annotation not available
    
  0.634
PTPN3
Protein tyrosine phosphatase non-receptor type 3.
    
  0.634
USP31
Ubiquitin specific peptidase 31.
    
 
 0.569
MANF
Mesencephalic astrocyte derived neurotrophic factor.
     
 0.561
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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