STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRQProtein tyrosine phosphatase receptor type Q. (2333 aa)    
Predicted Functional Partners:
MYO6
Myosin VI.
    
 
 0.763
OTOGL
Otogelin like.
 
 
 0.762
MANF
Mesencephalic astrocyte derived neurotrophic factor.
     
 0.701
TMTC4
Transmembrane O-mannosyltransferase targeting cadherins 4.
    
 0.683
USP31
Ubiquitin specific peptidase 31.
   
 
 0.680
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.656
RDX
Radixin.
    
 
 0.643
OTOG
Otogelin.
 
  
 0.557
ENSNVIP00000023996
annotation not available
    
 0.544
PITPNB
Phosphatidylinositol transfer protein beta.
    
 
 0.539
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.