STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTNSmoothelin. (916 aa)    
Predicted Functional Partners:
CNN1
Calponin 1.
   
  
 0.749
MYH11
Myosin heavy chain 11.
   
 
 0.665
CNN2
Calponin 2.
   
  
 0.661
ENSNVIP00000021219
Retinol binding protein 1.
      
 0.654
TAGLN
Transgelin.
   
  
 0.635
ENSNVIP00000022311
annotation not available
   
  
 0.626
ENSNVIP00000024871
annotation not available
   
  
 0.626
SMTNL1
Smoothelin like 1.
      
0.613
MYOCD
Myocardin.
   
  
 0.579
ENSNVIP00000024455
annotation not available
      
 0.528
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.