STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCL20C-C motif chemokine ligand 20. (96 aa)    
Predicted Functional Partners:
CCR6
C-C motif chemokine receptor 6.
     
 0.952
CX3CR1
C-X3-C motif chemokine receptor 1.
     
 0.947
CCR7
C-C motif chemokine receptor 7.
     
 0.934
CXCR3
C-X-C motif chemokine receptor 3.
     
 0.933
ENSNVIP00000001944
annotation not available
     
 0.930
CCR1
C-C motif chemokine receptor 1.
     
 0.928
ENSNVIP00000027695
annotation not available
     
 0.926
CXCR4
C-X-C motif chemokine receptor 4.
     
 0.924
CCR5
C-C motif chemokine receptor 5 (gene/pseudogene).
     
 0.924
CXCR5
C-X-C motif chemokine receptor 5.
     
 0.917
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.