STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001949annotation not available (409 aa)    
Predicted Functional Partners:
SMC5
Structural maintenance of chromosomes 5.
   
 0.711
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.699
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.689
ENSNVIP00000017435
annotation not available
   
 0.662
ENSNVIP00000001728
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.658
TEX28
Testis expressed 28.
      
 0.535
ENSNVIP00000005145
Tyrosinase.
    
 
 0.448
TMCC1
Transmembrane and coiled-coil domain family 1.
      
 0.438
ENSNVIP00000024637
annotation not available
      
 0.438
ENSNVIP00000026015
annotation not available
    
 
 0.415
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.