STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS3BCAS3 microtubule associated cell migration factor. (914 aa)    
Predicted Functional Partners:
C16orf70
Chromosome 16 open reading frame 70.
   
 
 0.933
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 
 0.817
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.764
WDR45B
WD repeat domain 45B.
   
  
 0.760
BCAS4
Breast carcinoma amplified sequence 4.
      
 0.756
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 
 0.755
ENSNVIP00000014649
annotation not available
      
 0.747
SEL1L3
SEL1L family member 3.
   
  
 0.742
FBXL20
F-box and leucine rich repeat protein 20.
      
 0.707
SUSD4
Sushi domain containing 4.
      
 0.695
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.