STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000002001Dynein assembly factor with WD repeats 1. (430 aa)    
Predicted Functional Partners:
PRPF3
pre-mRNA processing factor 3.
   
 0.968
PRPF31
pre-mRNA processing factor 31.
   
 0.941
ENSNVIP00000024252
pre-mRNA processing factor 6.
   
 0.932
PRPF8
pre-mRNA processing factor 8.
   
 0.929
ENSNVIP00000029497
Elongation factor Tu GTP binding domain containing 2.
   
 0.929
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.923
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.915
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.911
ENSNVIP00000027125
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.907
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.905
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.