Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP1GTP binding protein 1. (669 aa)    
Predicted Functional Partners:
CCDC9
Coiled-coil domain containing 9.
   
  
 0.764
NUDCD3
NudC domain containing 3.
      
 0.706
UBFD1
Ubiquitin family domain containing 1.
      
 0.704
ENSNVIP00000024667
Oxidoreductase NAD binding domain containing 1.
      
 0.642
ZNF641
Zinc finger protein 641.
      
 0.640
ENSNVIP00000003730
annotation not available
    
   0.627
CCDC177
Coiled-coil domain containing 177.
      
 0.602
GTPBP3
GTP binding protein 3, mitochondrial.
      
 0.562
PCDH7
Protocadherin 7.
      
 0.557
UMOD
Uromodulin.
      
 0.552
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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