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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000002103Ubiquitin-fold modifier conjugating enzyme 1. (167 aa)    
Predicted Functional Partners:
UBA5
Ubiquitin like modifier activating enzyme 5.
  
 
 
 0.985
ENSNVIP00000002231
annotation not available
   
 
 0.870
ENSNVIP00000026714
annotation not available
   
 
 0.870
UFL1
UFM1 specific ligase 1.
    
 
 0.854
DDRGK1
DDRGK domain containing 1.
    
 
 0.764
UFSP2
UFM1 specific peptidase 2.
   
  
 0.751
ENSNVIP00000007480
Syntrophin gamma 1.
      
 0.734
UFSP1
UFM1 specific peptidase 1 (inactive).
  
  
 0.689
SP4
Sp4 transcription factor.
      
 0.623
RLF
Rearranged L-myc fusion.
      
 0.615
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.