STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCO2Single-pass membrane protein with coiled-coil domains 2. (348 aa)    
Predicted Functional Partners:
PPFIBP1
PPFIA binding protein 1.
      
 0.737
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.730
MOB2
MOB kinase activator 2.
      
 0.613
OSBPL8
Oxysterol binding protein like 8.
      
 0.556
ASAH2
N-acylsphingosine amidohydrolase 2.
      
 0.536
PPFIBP2
PPFIA binding protein 2.
      
 0.488
ENSNVIP00000028447
1,4-alpha-glucan branching enzyme 1.
      
 0.488
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
      
 0.480
STK38L
Serine/threonine kinase 38 like.
      
 0.440
CLNK
Cytokine dependent hematopoietic cell linker.
  
     0.428
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.